Publications
Geomicrobiology Group
2019
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Lahme, S., Callbeck, C.M., Eland, L.E., Wipat, A., Enning, D., Head, I.M., Hubert, C.R.J. Comparison of sulfide‐oxidizing Sulfurimonas strains reveals a new mode of thiosulfate formation in subsurface environments. Environmental Microbiology, (2019)
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Bell, E., Sherry, A., Pilloni, G., Suárez‐Suárez, A., Cramm, M.A., Cueto, G., Head, I.M., Hubert, C.R.J. Sediment cooling triggers germination and sulfate reduction by heat‐resistant thermophilic spore‐forming bacteria. Environmental Microbiology 22, 456-465 (2019)
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Cramm, M.A., Chakraborty, A., Li, C., Ruff, E., Jørgensen, B.B., Hubert, C.R.J. Freezing tolerance of thermophilic bacterial endospores in marine sediments. Front Microbiol 10, 945 (2019)
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Dong, X., Greening, C., Rattray, J.E., Chakraborty, A., Chuvochina, M., Mayumi, D., Dolfing, J., Li., C, Brooks, J.M., Bernard, B.B., Groves, R.A., Lewis, I.A., Hubert, C.R.J. Metabolic potential of uncultured bacteria and archaea associated with petroleum seepage in deep-sea sediments. dzܲ 10, 1816 (2019)
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Hanson, C.A., Mueller, A.L., Loy, A., Dona, C., Appel, R., Jørgensen, B.B., Hubert, C.R.J. Historical Factors Associated With Past Environments Influence the Biogeography of Thermophilic Endospores in Arctic Marine Sediments. Front Microbiol 10, 245 (2019)
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Carlson, H.K., Hubert, C.R.J. Mechanisms and Monitoring of Oil Reservoir Souring Control by Nitrate or Perchlorate Injection. McGenity T. (eds) Microbial Communities Utilizing Hydrocarbons and Lipids: Members, Metagenomics and Ecophysiology. Handbook of Hydrocarbon and Lipid Microbiology, (2019)
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Lahme, S., Enning, D., Callbeck, C.M., Menendez Vega, D., Curtis, T.P., Head, I.M., Hubert, C.R.J. Metabolites of an oil field sulfide-oxidizing, nitrate-reducing Sulfurimonas sp. cause severe corrosion. Appl Environ Microbiol 85, e01891-18 (2019)
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Wasmund, K., Pelikan, C., Watzka, M., Richter, A., Noel, A., Hubert, C.R.J., Rattei, T.M Hofmann, T., Herbold, C.W., Loy, A. DNA-foraging bacteria in the seafloor. bioRxiv 528695, (2019)
2018
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Chakraborty, A., Ellefson, E., Li, C., Gittins, D., Brooks, J.M., Bernard, B.B., Hubert, C.R.J. Thermophilic endospores associated with migrated thermogenic hydrocarbons in deep Gulf of Mexico marine sediments. ISME J 12, 1895–1906 (2018)
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Bell, E., Blake, L.I., Sherry, A., Head, I.M., Hubert, C.R.J. Distribution of thermophilic endospores in a temperate estuary indicate that dispersal history structures sediment microbial communities. Environmental Microbiology 20, 1134-1147 (2018)
2017
- Dolfing, J., Hubert, C.R.J. Using Thermodynamics to Predict the Outcomes of Nitrate-Based Oil Reservoir Souring Control Interventions. Front Microbiol 8, 2575 (2017)
- Wehrmann, L.M., Riedinger, N., Brunner, B., Kamyshny A., Hubert, C.R.J., Herbert, L.C., Brüchert, V., Jørgensen, B.B.,Ferdelman, T.G., Formolo, M.J. Iron-controlled oxidative sulfur cycling recorded in the distribution and isotopic composition of sulfur species in glacially influenced fjord sediments of west Svalbard. Chemical Geology 466, 678-695 (2017)
- Saad, S., Bhatnagar, S., Tegetmeyer, H.E., Geelhoed, J.S., Strous, M., Ruff, S.E. Transient exposure to oxygen or nitrate reveals ecophysiology of fermentative and sulfate‐reducing benthic microbial populations. ԱDzѾDzDZ 19, 4866–4881 (2017)
- Rosa de Rezende, J., Hubert, C.R.J., Røy, H., Kjeldsen, K.U., Jørgensen, B.B. Estimating the abundance of endospores of sulfate-reducing bacteria in environmental samples by inducing germination and exponential growth. Geomicrobiology Journal 34, 338-345 (2017)
2016
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Robador, A., Müller, A., Sawicka, J., Berry, D., Hubert, C.R.J., et al. Activity and community structures of sulfate-reducing microorganisms in polar, temperate and tropical marine sediments. ISME J 10, 796–809 (2016)
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McCann, C.M., Wade, M.J., Gray, N.D., Roberts, J.A., Hubert, C.R.J., Graham D.W. Microbial communities in a high arctic polar desert landscape. Front Microbiol 7, 419 (2016)
2015
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Tan, B., Jane Fowler, S., Laban, N., Dong, X., Sensen, C.W., Foght, J., Gieg, L.M. Comparative analysis of metagenomes from three methanogenic hydrocarbon-degrading enrichment cultures with 41 environmental samples. ISME J 9, 2028-2045 (2015)
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Abu Laban, N., Dao, A., and Foght, J. DNA Stable-Isotope Probing of Oil Sands Tailings Pond Enrichment cultures Reveals Different Key Players for Toluene Degradation Under methanogenic and Sulfidogenic Conditions. FEMS Microbial Ecology 91, (2015)
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O'sullivan, L.A., Roussel, E.G., Weightman, A.J., Webster, G., Hubert, C.R.J., Bell, E., Head, I., Sass, H., Parkes, R.J. Survival of Desulfotomaculum spores from estuarine sediments after serial autoclaving and high-temperature exposure. ISME J 9, 922-933 (2015)
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Abu Laban, N., Tan, B., Dao, A., and Foght, J. Draft Genome Sequence of Uncultivated Desulfosporosinus sp. Strain Tol-M, Obtained by Stable Isotope Probing Using [13C6] Toluene. Genome Announcements 3, e10422-14 (2015)
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Abu Laban, N., Tan, B., Dao, A., and Foght, J. Draft Genome Sequence of Uncultivated Toluene-Degrading Desulfobulbaceae Bacterium Tol-SR, Obtained by Stable Isotope Probing Using [13C6] Toluene. Genome Announcements 3, e10423-14 (2015)
2014
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Abu Laban, N., Semple, K., Dao, A., and Foght, J. Biodegradation of C7 and C8 iso-Alkanes under Methanogenic Conditions. Environmental Microbiology, (2014)
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Tan, B., Charchunk, R., Li, C., Nesbø, C., Abu Laban, N., and Foght, J. Draft Genome Sequence of Uncultivated Firmicutes (Peptococcaceae SCADC) Single Cells Sorted from Methanogenic Alkane-Degrading Cultures. Genome Announcements 2, e00909-14 (2014)
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Müller, A.L., Rosa De Rezende, J., Hubert, C.R.J., Kjeldsen, K.U., Lagkouvardos, I., Berry, D., Jørgensen, B.B., Loy, A. Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents. ISME J 8, 1153-1165 (2014)